Summary of the pathway databases loaded in ComPath and their content
Resource | Pathways | Genes | Version Date |
---|---|---|---|
WikiPathways | 438 | 6015 | Empty |
Reactome | 2195 | 10633 | Empty |
KEGG | 330 | 7425 | Empty |
This Euler diagram shows the genetic coverage over all HGNC symbols known for all databases.
Explore gene pleiotropy by finding the pathways associated to a given gene.
Database | Identifier | Name | Pathway Size |
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Analyze the distribution of the pathways and genes for each individual database. By clicking in the button of the databases below, you can see analyze the gene promiscuity and pathway size for that particular database. The distributions below can be zoomed after going into the dedicated pathway database page.
ComPath is developed and maintained in an academic capacity by Daniel Domingo-Fernández and Charles Tapley Hoyt at the Fraunhofer SCAI Department of Bioinformatics. This web application relies on data loaded from KEGG, Reactome, and WikiPathways Restful APIs, as well as MSigDB. More information here.